Package pal.eval

Interface SiteDetails


public interface SiteDetails
  • Method Details

    • getRelatedModel

      SubstitutionModel getRelatedModel()
    • getSitePosteriors

      double[] getSitePosteriors(int site)
    • getSiteLikelihoods

      double[] getSiteLikelihoods()
      Get the likelihoods for each site (not the log likelihoods)
      Returns:
      a double array of likelihoods matching each site
    • getSiteLogLikelihoods

      double[] getSiteLogLikelihoods()
      Get the likelihoods for each site (logged)
      Returns:
      a double array of log likelihoods matching each site