Uses of Class
pal.math.MersenneTwisterFast
Packages that use MersenneTwisterFast
Package
Description
Classes for math stuff such as optimisation, numerical derivatives, matrix exponentials,
random numbers, special function etc.
Classes describing substitution models, i.e.
-
Uses of MersenneTwisterFast in pal.math
Fields in pal.math declared as MersenneTwisterFastModifier and TypeFieldDescriptionstatic MersenneTwisterFast
MathUtils.random
A random number generator that is initialized with the clock when this class is loaded into the JVM. -
Uses of MersenneTwisterFast in pal.substmodel
Constructors in pal.substmodel with parameters of type MersenneTwisterFastModifierConstructorDescriptionSequenceSimulator
(SubstitutionModel model, int sequenceLength, MersenneTwisterFast random, boolean stochasticDistribution) A constructor (with no provided random number generator - a fresh one is created) -
Uses of MersenneTwisterFast in pal.treesearch
Methods in pal.treesearch with parameters of type MersenneTwisterFastModifier and TypeMethodDescriptionfinal void
FreeBranch.doNNI
(MersenneTwisterFast r) static final String[][]
SearcherUtils.split
(String[] leafNames, MersenneTwisterFast r)