Uses of Interface
pal.eval.MolecularClockLikelihoodModel.Leaf
Packages that use MolecularClockLikelihoodModel.Leaf
Package
Description
Classes for evaluating evolutionary hypothesis (chi-square and likelihood
criteria) and estimating model parameters.
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Uses of MolecularClockLikelihoodModel.Leaf in pal.eval
Methods in pal.eval that return MolecularClockLikelihoodModel.LeafModifier and TypeMethodDescriptionMolecularClockLikelihoodModel.Instance.createNewLeaf
(MolecularClockLikelihoodModel.HeightConverter converter, PatternInfo pattern, int[] patternStateMatchup) -
Uses of MolecularClockLikelihoodModel.Leaf in pal.treesearch
Methods in pal.treesearch that return MolecularClockLikelihoodModel.LeafModifier and TypeMethodDescriptionConstraintModel.GroupManager.createNewClockLeaf
(PatternInfo pattern, int[] patternStateMatchup) FixedBSRDTGlobalClockModel.createNewClockLeaf
(PatternInfo pattern, int[] patternStateMatchup) FixedSRDTGlobalClockModel.createNewClockLeaf
(PatternInfo pattern, int[] patternStateMatchup) GlobalClockModel.createNewClockLeaf
(PatternInfo pattern, int[] patternStateMatchup) MRDTGlobalClockModel.createNewClockLeaf
(PatternInfo pattern, int[] patternStateMatchup) SRDTGlobalClockModel.createNewClockLeaf
(PatternInfo pattern, int[] patternStateMatchup) protected final MolecularClockLikelihoodModel.Leaf
AbstractLeafNode.createNewConstrainedLeafCalculator
(ConstraintModel.GroupManager parentGroup)