Package pal.alignment

Class Genotype

java.lang.Object
pal.alignment.Genotype

public class Genotype extends Object
This class provides from genotype to be constructed from separate but paired alignments. This is just a very basic implementation. Other suggested approaches would be welcome.
Version:
$Id:
Author:
Ed Buckler
  • Constructor Details

  • Method Details

    • getAlignment

      public Alignment getAlignment(int i)
    • getData

      public char getData(int seq, int site, int allele)
      sequence alignment at (sequence, site, allele)